Migratory patterns of American shad (Alosa sapidissima) revealed by natural geochemical tags in otoliths

Submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy at the Massachusetts Institute of Technology and the Woods Hole Oceanographic Institution February 2007Geochemical signatures in the otoliths of diadromous fishes may allow for retrospective analyses of natal origins. In an assessment of river-specific signatures in American shad (Alosa sapidissima), an anadromous clupeid native to the Atlantic coast of North America, stable isotope and elemental ratios in otoliths of juvenile American shad produced accurate natal tags from 12 rivers. Significant inter-annual variability in geochemical signatures from several rivers was detected, due largely to differences in δ18O values among years. The database was further expanded to include 20 rivers from Florida to Quebec, encompassing all major spawning populations. This task was accomplished by collecting juvenile otoliths along with water samples from rivers where juveniles were not sampled. Regressions between otolith and water chemistry for those rivers where both were collected showed significant relationships for Sr:Ca, Ba:Ca, δ18O, and 87Sr:86Sr ratios but not for Mg:Ca or Mn:Ca. Despite reducing the combined signature to only four chemical ratios, cross-validated classification accuracies of knownorigin juveniles averaged 93%. Ground-truthed signatures were used to classify migrants of unknown origins. Adults returning to spawn in the York River were classified according to their otolith composition. Only 6% of spawners originated from rivers other than the York, supporting the hypothesis that most American shad spawn in their natal river. Of remaining spawners, 79% originated from the Mattaponi River and 21% from the Pamunkey River. The results suggested that while most American shad home to their natal river there is less fidelity to individual tributaries, allowing subsidies to subpopulations with persistent recruitment failure. Otolith signatures were also used in mixed-stock analyses of immature migrants along the coast of Maine in the spring and Minas Basin in the summer. Mixed-stock compositions showed remarkably low diversity and were dominated by fish from the Shubenacadie and Hudson rivers, with an increasing proportion of Potomac River fish over time. In contrast to results from adult tagging studies, southern stocks were virtually absent. These data suggest ontogenetic shifts in migratory behavior. The thesis concludes with a report that water contributed 83% of Sr and 98% of Ba in the otoliths of a marine fish.Support was given by National Science Foundation grants to Dr. Thorrold (OCE-0215905 and OCE-0134998). I received additional support from the Woods Hole Oceanographic Institution (WHOI) Academic Programs Office, the American Museum of Natural History Lerner-Gray Fund for Marine Research, a SEASPACE, Inc. Research Scholarship, and a WHOI Ocean Life Institute Research Grant

3D simulations of self-propelled, reconstructed jellyfish using vortex methods

We present simulations of the vortex dynamics associated with the self-propelled motion of jellyfish. The geometry is obtained from image segmentation of video recordings from live jellyfish. The numerical simulations are performed using three-dimensional viscous, vortex particle methods with Brinkman penalization to impose the kinematics of the jellyfish motion. We study two types of strokes recorded in the experiment1. The first type (stroke A) produces two vortex rings during the stroke: one outside the bell during the power stroke and one inside the bell during the recovery stroke. The second type (stroke B) produces three vortex rings: one ring during the power stroke and two vortex rings during the recovery stroke. Both strokes propel the jellyfish, with stroke B producing the highest velocity. The speed of the jellyfish scales with the square root of the Reynolds number. The simulations are visualized in a fluid dynamics video.Comment: 1 page, 1 figur

Quantum bit detector

We propose and analyze an experimental scheme of quantum nondemolition detection of monophotonic and vacuum states in a superconductive toroidal cavity by means of Rydberg atoms.Comment: 4 pages, 3 figure